🧬 Trait-Genome Links

Derea Genetics & Genomics 📍 Ethiopia (Southern Ethiopia) (Various)

Chloroplast Genome:?Size 168,778 bp; LSC 88,719 bp; SSC 11,075 bp; IR 34,462/34,518 bp.?Genes:?Total 137 genes (105 unique, 23 duplicate copies); tRNA 37/28; rRNA 8/4; Protein-coding 91/76; Exons 56; Introns 37.?GC Content:?37%.?Key Finding:?Chloroplast genome characteristics consistent with other l...

Derea Genetics & Genomics 📍 Ethiopia (Southern Ethiopia) (Various)

Genome Assembly:?GCA_001884805.1.?Total Length:?429,479,738 nucleotides (78.5% of estimated genome size of 547 Mbp).?Contig N50:?10,278 nucleotides.?Scaffold N50:?n.d. (not determined).?Genome Completeness (BUSCO3):?Complete single copy: 1,075; Complete duplicated: 99; Fragmented: 86; Missing: 180; ...

Derea Genetics & Genomics 📍 Ethiopia (Southern Ethiopia) (Various)

Microsatellite Markers:?93,180 microsatellites identified.?Primer Modelling:?52,570 successful (56.42% success rate).?Non-redundant Primers:?49,258.?Redundant Primers:?6.39% (lowest).?Polymorphic Markers:?36,923.?Transferable Markers:?46,305.?Genome:?Used for microsatellite landscape analysis.?Key F...

Maze Ethnobotany & Indigenous Knowledge / Genetic Resources & Diversity 📍 Gamo Zone (Chencha & Kogota Districts)

Morphological:?Bitter amicho; originated from Doko Mesho area.?Agro-ecology:?High altitude.?Maturity:?Late.?Plant Height:?Vigorous.?Use Classification:?Kocho & Bulla (high yield; large, thick pseudostem, big corm, late maturing).?Key Finding:?Used for Kocho and Bulla production.

Maze Diseases & Pests 📍 Gamo Zone (Gamo Highlands)

Morphological:?Enset variety evaluated for tolerance to Xvm.?Agronomic:?Did not show typical wilt symptoms until after 45 days of infected enset cultivation.?Disease Response:?Showed tolerance to Enset Bacterial Wilt (EBW); all field-tested varieties except Maze began showing symptoms after 45 days....

Maze Genetics & Genomics 📍 Southern Nations Nationalities and Peoples (Gamo Gofa)

Molecular:?Genotyped using tGBS technology.?Type:?Domesticated.?Sample ID:?P3S42ID452.?Coordinates:?6.5?N, 37.7?E.?Collection Date:?17/10/2018.

Maze Genetics & Genomics 📍 Southern Nations Nationalities and Peoples (Wolayita)

Molecular:?Genotyped using tGBS technology.?Type:?Domesticated.?Sample ID:?P3S43ID623.?Coordinates:?6.9?N, 37.8?E.?Collection Date:?09/04/2018.

Maze Genetics & Genomics 📍 Southern Nations Nationalities and Peoples (Gamo Gofa)

Molecular:?Genotyped using tGBS technology.?Type:?Domesticated.?Sample ID:?P3S44ID850.?Coordinates:?6.2?N, 37.6?E.?Collection Date:?18/10/2018.

Onjamo Genetics & Genomics 📍 Ethiopia (Southern Ethiopia) (Various)

Chloroplast Genome:?Size 168,758 bp; LSC 88,740 bp; SSC 11,080 bp; IR 34,440/34,264 bp.?Genes:?Total 137 genes (105 unique, 23 duplicate copies); tRNA 37/28; rRNA 8/4; Protein-coding 91/76; Exons 56; Introns 37.?GC Content:?37%.?Key Finding:?Chloroplast genome characteristics consistent with other l...

Onjamo Genetics & Genomics 📍 Ethiopia (Southern Ethiopia) (Various)

Genome Assembly:?GCA_001884845.1.?Total Length:?444,841,970 nucleotides (81.3% of estimated genome size of 547 Mbp).?Contig N50:?15,546 nucleotides.?Scaffold N50:?16,208 nucleotides.?Genome Completeness (BUSCO3):?Complete single copy: 1,079; Complete duplicated: 106; Fragmented: 89; Missing: 166; To...