📋 Derea

💡 Landrace Details: This page shows all records for Derea from the database. Each row represents one study or reference that mentions this landrace.
3 total records 1 zones 1 study categories 3 unique citations ⬇️ Export CSV
📌 Zones: Ethiopia (Southern Ethiopia) (3)
# Zone Woreda Category Description Citation
1 Ethiopia (Southern Ethiopia) Various Genetics & Genomics Microsatellite Markers:?93,180 microsatellites identified.?Primer Modelling:?52,570 successful (56.42% success rate).?Non-redundant Primers:?49,258.?Redundant Primers:?6.39% (lowest).?Polymorphic Markers:?36,923.?Transferable Markers:?46,305.?Genome:?Used for microsatellite landscape analysis.?Key Finding:?Lowest redundant primers among assemblies; moderate microsatellite count. Biswas et al. 2020
2 Ethiopia (Southern Ethiopia) Various Genetics & Genomics Chloroplast Genome:?Size 168,778 bp; LSC 88,719 bp; SSC 11,075 bp; IR 34,462/34,518 bp.?Genes:?Total 137 genes (105 unique, 23 duplicate copies); tRNA 37/28; rRNA 8/4; Protein-coding 91/76; Exons 56; Introns 37.?GC Content:?37%.?Key Finding:?Chloroplast genome characteristics consistent with other landraces; contributes to understanding of genetic diversity and evolution. Biswas et al. 2025
3 Ethiopia (Southern Ethiopia) Various Genetics & Genomics Genome Assembly:?GCA_001884805.1.?Total Length:?429,479,738 nucleotides (78.5% of estimated genome size of 547 Mbp).?Contig N50:?10,278 nucleotides.?Scaffold N50:?n.d. (not determined).?Genome Completeness (BUSCO3):?Complete single copy: 1,075; Complete duplicated: 99; Fragmented: 86; Missing: 180; Total: 1,440.?Key Finding:?Lowest genome length and coverage among assembled varieties; lowest contig N50. Venkatesan et al. 2022